1. ERGO Genome Analysis and Discovery System
ERGO provides a systems-biology informatics toolkit centered on comparative genomics to capture, query and visualize sequenced genomes. Building upon the most comprehensive genomic database available anywhere integrated with the largest collection of microbial metabolic and non-metaboli...
标签:Metabolic reconstruction,Phylogenetics, Comparative genomics, SNP Annotation, SNP discovery, Alignment, Exome analysis, Metagenomics,Pathway analysis, Comparative transcriptomics, Functional Genomics, Gene Expression Analysis, Genome Wide Association Stud
2. ExomeCopy
CNV detection from exome sequencing read depth
标签:Exome and Whole genome variant detection, Copy number estimation, Exome analysis
3. GenomeBrowse
A free genome browser for exploring sequencing pile-up and coverage data with numerous annotation tracks hosted on the cloud.
标签:Sequence analysis, DNA-Seq,Alignment, De novo sequencing,Exome analysis, Exome and whole genome variant detection, Genetics, Whole Genome Resequencing, Next Generation Sequencing,Genomics
4. Ingenuity Variant Analysis
Ingenuity Variant Analysis is a web application that helps researchers studying human disease to identify causal variants from human resequencing data in just minutes. Ingenuity Variant Analysis combines analytical tools and integrated content to help you rapidly identify and prioritize...
标签:Genomics, Exome, Whole Genome Resequencing, SNPs
5. Variation toolkit
A set of C++ tools for the interpretation of VCF data.
标签:Genomics, Exome and whole genome variant detection, SNP Annotation
6. IOmics
iOmics is a cloud based workflow analysis framework for managing, analyzing and visualizing NGS data.
标签:Genomics, Transcriptomics,Epigenomics, RNA-Seq, Exome and Whole genome variant detection
7. Spiral Genetics
Spiral Genetics provides a novel aligner/variant caller, Anchored Assembly, which can detect large structural variations using short read NGS data with unmatched precision.
标签:Alignment, DNA-Seq, Exome and Whole genome variant detection, De novo Assembly,Genomic Assembly, Mapping,Quality Control, Read alignment, Reference assembly,Resequencing, SNP discovery,Sequence analysis, Whole Genome Resequencing